Monday, 17 October 2016

WEEK 3: HISTORY AND EVOLUTION OF LIFE ON EARTH PART II AND PROKARYOTIC CELLS, VIRUS, VIROID,PRION




 In this part II of history and evolution of life on earth, we learned about systematics, taxonomy and classification. Evolution produces biodiversity of organisms. What is Systematics? Systematics is the study of biological diversity and its evolution. Taxonomy, a subdivision of systematics is the science of biological classification- identification, nomenclature and making into a system. This classification systems help to clarify the relationship among organisms. It also helps us to remember organisms and their traits. This system enable us to communicate clearly about the identity of organisms being studied. If there is no classification system, it will make the communication between scientists or people who studied in this field become difficult as there will be miscommunication in order to differentiate one organism from another species. There are many ways to classify the animals by seeing their forms, colour, size, chemical structure and genetic make up but now focus is more on molecular similarities, proteins, DNA and genes. Caralus Linnaeus, a Swedish botanist was first to develop and publish the first comprehensive and consistent classification system for both plants and animals. Each species is given a unique scientific name. For this semester, the syllabus for cell biology class and microbiology class are almost the same. In microbiology class, we also learned about taxonomy, classification and so on. What I can relate to this topic from microbiology class is about the scientific name. From the scientific names of a microbe, we can know its shape, who is the founder of the microbe, what kind of nutrient that it gets, and what diseases can be caused by the microbe. It is really useful and interesting. I got really excited actually when the first time I knew that we can get those information from the name of the microbes.
Furthermore, there are 7 taxa which are kingdom, phylum, class, order, family, genus and species. Next, we learned about phylogenetics which is the study of evolutionary relationships among and between species. The relationships usually presented as a phylogenetic tree or cladogram. Each branch of the cladogram is called as clade. Classic phylogenetics dealt mainly with physical or morphological features. Modern phylogeny uses information extracted from genetic material which is mainly DNA and protein sequences.

Other than that, we studied about prokaryotic cells, virus, viroid and prions. First of all, we read about the discovery of cell. The first person who discovered cell was Robert Hooke while looking at a slice of cork. He described cells as tiny boxes or honey combs. He also thought cells only existed in plants and fungi. On 1673, Anton van Leeuwenhoek used his hand microscope to view samples from a pond and discovered single cell organisms. There are three basic cell theory which are:

1) All living things are made up of cells.
2) The cell is the basic unit of life in all living things.
3) New cells arise from the pre-existing cells.
     
     After that, there are four additional statements which are   the cell contains hereditary information which is passed on from cell to cell during cell division,  all cells are basically the same in chemical composition and metabolic activities,  all basic chemical and physiological functions are carried out inside the cells and  cells activities depends on the activities of subcellular structures within the cell.
I have been learning about prokaryotes and eukaryotes since in secondary school and the basic about the cells. In the lecture, I have been introduced more details about the structure of the cells such as the materials that made up the cell wall, the important to distinguish between gram positive and negative bacteria, the features of the cell membrane and the structure of nucleoid region in bacteria. The new things for me are virus, viroid and prion. 

 Image result for naked virus

Viruses can be classified according to their genetic, shape, symmetry of the capsid, presence and absence of envelope and type of the host. Viruses reproduce in 2 ways, lytic cycle and lysogeny cycle. Lytic cycle is virus will lysis and rupture the host and distribute its particle. In lysogeny cyle, the virus will grow together with the host. Then, DNA’s virus enters the host and integrate the host chromosome. For viroid, it is a small circular RNA molecules without a protein coat. It infects plant and lead to dramatic economic losses in agriculture and horticulture worldwide. The last one is prions. Prion is an infectious agent that is composed primarily of protein.
 Image result for viroids and prions


 It propagates by transmitting a mis-folded protein state. This mis-folded protein can lead to mad cow disease and Alzheimer.

 Image result for viroids and prions

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